Publications

ACHIEVEMENTS

2019

All in One High Quality Genomic DNA and Total RNA Extraction From Nematode Induced Galls for High Throughput Sequencing Purposes

Ana Claudia Silva, Virginia Ruiz-Ferrer, Angela Martinez-Gomez, Marta Barcala, Carmen Fenoll and Carolina Escobar

Frontiers in Plant Science, 10:657, 2019, https://doi.org/10.3389/fpls.2019.00657
Effect of HCOOK/ethanol on Fe/HUSY, Ni/HUSY and Ni Fe/HUSY catalysts on lignin depolymerisation to benzyl alcohols and bioaromatics

W. Wanwitoo, J. N. Beltramini, J. Bartley, N. Laosiripojana and W. Doherty, William

ACS Omega, 4(16):16980-16993, 2019.
The selective cleavage of lignin aliphatic C-O linkages by solvent-assisted fast pyrolysis (SAFP)

M. Rashidi, J.N. Beltramini and D. Martin

Journal of inclusion Phenomena and Macrocylic Chemistry, 94, 297-307, 2019.
Thermocatalytic cleavage of C-C and C-O bonds in model compounds and kraft lignin by NiMoS2/C nanocatalysts

S. Mukundan, L. Atanda and J. N. Beltramini

RSC Sustainable Energy & Fuels, 3, 1317-1328, 2019.
Glycol Chitosan-Docosahexaenoic Acid Liposomes for Drug Delivery: Synergistic Effect of Doxorubicin-Rapamycin in Drug-Resistant Breast Cancer

Min Woo Kim, Takuro Niidome, Ruda Lee

Marine Drugs, 17 (10), 581, 2019.
Automated detection of glaucoma using optical coherence tomography angiogram Images

Chan Yam Meng, E.Y.K. Ng, V. Jahmunah, Joel En Wei Koh, Oh Shu Lih, Leonard Yip Wei Leon, U. Rajendra Acharya

Computers in Biology and Medicine, 115, 103483, 2019.
Computer-aided diagnosis for the identification of breast cancer using thermogram images: A comprehensive review

U. Raghavendra, Anjan Gudigar, Tejaswi N. Rao, Edward J. Ciaccio, E.Y.K. Ng, U. Rajendra Acharya

Infrared Physics & Technology, 102, 103041, 2019.

https://doi.org/10.1016/j.infrared.2019.103041
Automated plaque classification using computed tomography angiography and Gabor transformations

U. Rajendra Acharya, Kristen M. Meiburger, Joel En Wei Koh, Jahmunah Vicnesh, Edward J. Ciaccio, Oh Shu Lih, Sock Keow Tan, Raja Rizal Azman Raja Aman, Filippo Molinari, Kwan Hoong Ng

Artificial Intelligence in Medicine, 100, 101724, 2019.

https://doi.org/10.1016/j.artmed.2019.101724
Basic proline-rich protein-mediated microtubules are essential for lobe growth and flattened cell geometry

Jeh Haur Wong, Takehide Kato, Samuel Belteton, Rie Shimizu, Nene Kinoshita, Takumi Higaki, Yuichi Sakumura, Daniel B. Szymanski, Takashi Hashimoto

Plant Physiology, 181(4), 1535–1551, 2019.

https://doi.org/10.1104/pp.19.00811
Poly (Lactic Acid)/Thermoplastic Starch Films: Effect of Cardoon Seed Epoxidized Oil on Their Chemicophysical, Mechanical, and Barrier Properties

R. Turco, R. Ortega-Toro, R. Tesser, S. Mallardo , S. Collazo-Bigliardi, A. Chiralt Boix, M. Malinconico, M. Rippa, M. Di Serio, G. Santagata

Coatings, 9(9), 574, 2019.

https://www.mdpi.com/2079-6412/9/9/574
Partial structure investigation of the traditional bulk metallic glass Pd40Ni40P20

Shinya Hosokawa, Jean-Francois Berar, Nathalie Boudet, Wolf-Christian Pilgrim, Laszlo Pusztai, Satoshi Hiroi, Kenji Maruyama, Shinji Kohara, Hidemi Kato, Henry E. Fischer, and Anita Zeidler

Physical Review B, 100, 054204, 2019.

https://journals.aps.org/prb/abstract/10.1103/PhysRevB.100.054204
Molecular Dynamics Simulation Studies of the Temperature-Dependent Structure and Dynamics of Isopropanol Water Liquid Mixtures at Low Alcohol Content

Szilvia Pothoczki, Laszlo Pusztai and Imre Bako

The Journal of Physical Chemistry B, 123 (35), 7599-7610, 2019.

https://pubs.acs.org/doi/abs/10.1021/acs.jpcb.9b05631
Time-dependence of mechanical behavior of Shikotsu welded tuff at sub-zero temperatures

Kodama, J. I., Mitsui, Y., Hara, S., Fukuda, D., Fujii, Y., Sainoki, A., & Karakus, M

Cold Regions Science and Technology, 168, 102868, 2019.
Effects of H-bond asymmetry on the electronic properties of liquid water An AIMD analysis

Imre Bako, Janos Daru, Szilvia Pothoczki, Laszlo Pusztai, Kersti Hermansson

Journal of Molecular Liquids, 293, 111579, 2019.

https://doi.org/10.1016/j.molliq.2019.111579
Challenges in the use of zinc and its alloys as biodegradable metals: perspective from biomechanical compatibility

Guannan Li, Hongtao Yang, Yufeng Zheng, Xie-Hui Chen, Jian-An Yang, Donghui Zhu, Liqun Ruan, Kazuki Takashima

Acta Biomaterialia, 97(1), 23-45, 2019.

https://doi.org/10.1016/j.actbio.2019.07.038
Two- and three-body, and relaxation energy terms in water clusters: Application of the hierarchical BSSE corrected decomposition scheme

Imre Bako, Istvan Mayer, Andrea Hamza, Laszlo Pusztai

Journal of Molecular Liquids, 285, 171-177, 2019.

https://www.x-mol.com/paperRedirect/5650916
Fluorogenic Probe for Detecting Active Matrix Metalloproteinase-3 (MMP-3) in Plasma and Peripheral Blood Neutrophils to Indicate the Severity of Rheumatoid Arthritis

Ruda Lee, Sung-Jae Choi, Kyung Chul Moon, Jong Woong Park, Kwangmeyung Kim, Soo-Young Yoon and Inchan Youn

ACS Biomater. Sci. Eng., 5, 6, 3039-3048, 2019.
Developing heritable mutations in Arabidopsis thaliana using a modified CRISPR/Cas9 toolkit comprising PAM-altered Cas9 variants and gRNAs

Akihiro Yamamoto, Takashi Ishida#, Mika Yoshimura, Yuri Kimura and Shinichiro Sawa

Plant and Cell Physiology, 60(10), 2255-2262, 2019. # Corresponding author
Quantitative energy-based evaluation of the intensity of mining-induced seismic activity in a fractured rock mass

Atsushi Sainoki, Hani S. Mitri, Damodara Chinnasane, Adam Karl Schwartzkopff

Rock Mechanics and Rock Engineering, 52, 4651-4667, 2019.

https://doi.org/10.1007/s00603-019-01861-1
Primed histone demethylation regulates shoot regenerative competency

Ishihara H, Sugimoto K, Tarr PT, Temman H, Kadokura S, Inui Y, Sakamoto T, Sasaki T, Aida M, Suzuki T, Inagaki S, Morohashi K, Seki M, Kakutani T, Meyerowitz E, Matsunaga S

Nat Commun 10, 1786, 2019.

https://doi.org/10.1038/s41467-019-09386-5
Theoretical models for branch formation in plants

Akiko Nakamasu, Takumi Higaki

J Plant Res, 132(3), 325-333, 2019.

https://www.ncbi.nlm.nih.gov/pubmed/31004242
Self-Activating Catalyst for Glucose Hydrogenation in the Aqueous Phase under Mild Conditions

Serena Esposito, Brigida Silvestri, Vincenzo Russo, Barbara Bonelli, Maela Manzoli, Fabio A. Deorsola, Alessando Vergara, Antonio Aronne, and Martino Di Serio

ACS Catalysis 2019, 9 (4), 3426-3436.

https://pubs.acs.org/doi/10.1021/acscatal.8b04710
Cynara cardunculus Biomass Recovery: An Eco-Sustainable, Nonedible Resource of Vegetable Oil for the Production of Poly (lactic acid) Bioplasticizers

R. Turco, R. Tesser, M. E. Cucciolito, M. Fagnano, L. Ottaiano, S. Mallardo, M. Malinconico, G. Santagata , M. Di Serio

ACS Sustainable Chem. Eng., 2019, 7 (4), pp 4069-4077.

https://pubs.acs.org/doi/10.1021/acssuschemeng.8b05519
Developmental analyses of divarications in leaves of an aquatic fern Microsorum pteropus and its varieties

Saori Misyohi, Seisuke Kimura, Ryo Ootsuki, Takumi Higaki, Akiko Nakamasu

PLOS ONE 14, e0210141, 2019.

https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0210141
Fascin in lamellipodia contributes to cell elasticity by controlling the orientation of filamentous actin

Minami Tanaka, Yuki Fujii, Kazumi Hirano, Takumi Higaki, Akira Nagasaki, Ryoki Ishikawa, Takaharu Okajima, Kaoru Katoh

Genes Cells, 24: 202-213, 2019.

https://doi.org/10.1111/gtc.12671
Polar vacuolar distribution is essential for accurate asymmetric division of Arabidopsis zygotes

Yusuke Kimata, Takehide Kato, Takumi Higaki, Daisuke Kurihara, Tomomi Yamada, Shoji Segami, Miyo Terao Morita, Masayoshi Maeshima, Seiichiro Hasezawa, Tetsuya Higashiyama, Masao Tasaka, Minako Ueda

Proc Natl Acad Sci U S A, 116: 2338-2343, 2019.

https://doi.org/10.1073/pnas.1814160116
Anti-EGF receptor aptamer-guided co-delivery of anti-cancer siRNAs and quantum dots for theranostics of triple-negative breast cancer

Min Woo Kim, Hwa Yeon Jeong, Seong Jae Kang, In Ho Jeong, Moon Jung Choi, Young Myoung You, Chan Su Im, In Ho Song, Tae Sup Lee, Jin Suk Lee, Aeju Lee and Yong Serk Park

Theranostics, 9(3), 837, 2019.
Regulation of root-Knot nematode behavior by seed-coat mucilage-derived attractants

Allen Yi-Lun Tsai, Takumi Higaki, Chinh-Nghia Nguyen, Laetitia Perfus-Barbeoch, Brun Favery, Shinichiro Sawa

Molecular Plant, 12: 99-112, 2019.

https://doi.org/10.1016/j.molp.2018.11.008
An induction system for clustered stomata by sugar solution immersion treatment in Arabidopsis thaliana seedlings

Kae Akita, Takumi Higaki

Journal of Visualized Experiments, 144, e58951, 2019.

https://www.jove.com/video/58951/an-induction-system-for-clustered-stomata-sugar-solution-immersion
Temperature dependent network stability in simple alcohols and pure water: The evolution of Laplace spectra

I.Bako, I.Pethes, Sz.Pothoczki, L. Pusztai

Journal of Molecular Liquids, 273, 670-675, 2019. DOI:

https://doi.org/10.1016/j.molliq.2018.11.021